PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0008s0552.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 231aa    MW: 24953 Da    PI: 4.8552
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0008s0552.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.1e-183888155
                  AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         + y+GVr++   g+Wv+e+r+p   +k++r++lg+f t e+Aa+a++ a+++l+g
  Kaladp0008s0552.1.p 38 PVYRGVRRRN-AGKWVCELREP---NKKTRIWLGTFPTLEMAARAHDVAALALRG 88
                         68*****887.8*********8...347*************************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.6E-143888IPR001471AP2/ERF domain
SuperFamilySSF541712.55E-213998IPR016177DNA-binding domain
SMARTSM003801.1E-2839102IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.9E-313998IPR001471AP2/ERF domain
PROSITE profilePS5103222.4583996IPR001471AP2/ERF domain
CDDcd000186.36E-294098No hitNo description
PRINTSPR003671.5E-84051IPR001471AP2/ERF domain
PRINTSPR003671.5E-86278IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MDVSDLSNDH VSSHAPLLAS SNPKKRAGRK KFKETRHPVY RGVRRRNAGK WVCELREPNK  60
KTRIWLGTFP TLEMAARAHD VAALALRGPR ACLNFADSAW RLPVPGSGDA EEIRRAAVEA  120
AEMFRPGTTS FDDGGGASTS TSSGSCGDDE FDEVMIGSNG DGGVSWSGSG GGMFEMEIED  180
FLGMSSWGLM VEMAEGLMMA PPPPPPPPYW EAVGSQEMDN DYVSLWSFSF *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858875.11e-74PREDICTED: dehydration-responsive element-binding protein 1C-like
SwissprotQ9FJ932e-63DRE1D_ARATH; Dehydration-responsive element-binding protein 1D
SwissprotQ9SYS62e-63DRE1C_ARATH; Dehydration-responsive element-binding protein 1C
TrEMBLA0A022PVI81e-74A0A022PVI8_ERYGU; Uncharacterized protein
STRINGSolyc03g026270.1.13e-65(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25470.16e-43C-repeat/DRE binding factor 2